Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter permease | VAPA_RS19300 | Not Available | Negative | 4138514 - 4139176 | 23504.6 |
| methionine abc transporter atp-binding protein | VAPA_RS19305 | Not Available | Negative | 4139169 - 4140041 | 31966.6 |
| metq/nlpa family abc transporter substrate-binding protein | VAPA_RS19310 | Not Available | Positive | 4140281 - 4141099 | 29238.1 |
| peptide chain release factor 2 | VAPA_RS19315 | Not Available | Positive | 4141224 - 4142328 | 41016.8 |
| had family hydrolase | VAPA_RS19320 | Not Available | Positive | 4142332 - 4143021 | 25018.9 |
| aminopeptidase n | VAPA_RS19325 | Not Available | Positive | 4143005 - 4145719 | 100475.0 |
| class 1 fructose-bisphosphatase | VAPA_RS19330 | Not Available | Positive | 4145747 - 4146763 | 37619.3 |
| Trna-thr | Not Available | Not Available | Positive | 4146789 - 4146864 | Not Available |
| hnh endonuclease | VAPA_RS35540 | Not Available | Negative | 4147082 - 4147180 | 3557.18 |
| hypothetical protein | VAPA_RS35210 | Not Available | Negative | 4147209 - 4148141 | 34739.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
