Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yajq family cyclic di-gmp-binding protein | VAPA_RS19250 | Not Available | Positive | 4131705 - 4132190 | 17846.7 |
| tigr02281 family clan aa aspartic protease | VAPA_RS19255 | Not Available | Positive | 4132198 - 4132839 | 22376.2 |
| rida family protein | VAPA_RS19260 | Not Available | Negative | 4132849 - 4133202 | 12626.1 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | VAPA_RS19265 | Not Available | Negative | 4133208 - 4133843 | 22234.6 |
| aminoacyl-trna deacylase | VAPA_RS19270 | Not Available | Negative | 4133914 - 4134411 | 17893.7 |
| aldo/keto reductase | VAPA_RS19275 | Not Available | Negative | 4134408 - 4135469 | 38927.5 |
| alpha/beta fold hydrolase | VAPA_RS19280 | Not Available | Positive | 4135585 - 4136514 | 34921.5 |
| aspartate/glutamate racemase family protein | VAPA_RS19285 | Not Available | Negative | 4136528 - 4137220 | 25307.7 |
| hypothetical protein | VAPA_RS19290 | Not Available | Negative | 4137273 - 4137635 | 13013.2 |
| metq/nlpa family abc transporter substrate-binding protein | VAPA_RS19295 | Not Available | Negative | 4137659 - 4138480 | 29790.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
