Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ysc84-related protein | VAPA_RS19150 | Not Available | Negative | 4111762 - 4112346 | 19650.4 |
| hypothetical protein | VAPA_RS19155 | Not Available | Positive | 4112671 - 4114419 | 64276.8 |
| tonb-dependent siderophore receptor | VAPA_RS19160 | Not Available | Positive | 4114636 - 4116714 | 75977.4 |
| m20 family metallopeptidase | VAPA_RS19165 | Not Available | Positive | 4116798 - 4118093 | 46886.8 |
| phosphatase pap2 family protein | VAPA_RS19170 | Not Available | Positive | 4118206 - 4119438 | 42794.3 |
| Trna-asp | Not Available | Not Available | Positive | 4119494 - 4119570 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 4119640 - 4119715 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4119767 - 4119842 | Not Available |
| glutamate--trna ligase | VAPA_RS19190 | Not Available | Negative | 4119915 - 4121303 | 51518.6 |
| o-succinylhomoserine sulfhydrylase | VAPA_RS19195 | Not Available | Negative | 4121311 - 4122531 | 42909.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
