Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-ribosomal peptide synthetase | VAPA_RS19100 | Not Available | Negative | 4093773 - 4097114 | 120478.0 |
| beta-ketoacyl synthase n-terminal-like domain-containing protein | VAPA_RS19105 | Not Available | Negative | 4097111 - 4101673 | 161633.0 |
| non-ribosomal peptide synthetase | VAPA_RS19110 | Not Available | Negative | 4101675 - 4106990 | 192149.0 |
| taud/tfda family dioxygenase | VAPA_RS19115 | Not Available | Negative | 4107011 - 4108003 | 37110.9 |
| 4'-phosphopantetheinyl transferase family protein | VAPA_RS19120 | Not Available | Negative | 4108000 - 4108689 | 24457.1 |
| thioesterase ii family protein | VAPA_RS19125 | Not Available | Negative | 4108667 - 4109404 | 26741.1 |
| mbth family protein | VAPA_RS19130 | Not Available | Negative | 4109410 - 4109667 | 9659.31 |
| hypothetical protein | VAPA_RS19135 | Not Available | Negative | 4109768 - 4109971 | 7828.11 |
| sigma-70 family rna polymerase sigma factor | VAPA_RS19140 | Not Available | Negative | 4110068 - 4110613 | 20170.5 |
| hypothetical protein | VAPA_RS19145 | Not Available | Positive | 4110927 - 4111781 | 30913.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
