Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | VAPA_RS19000 | Not Available | Negative | 4062682 - 4064058 | 49392.3 |
| phosphomannomutase/phosphoglucomutase | VAPA_RS19005 | Not Available | Negative | 4064064 - 4065446 | 48472.3 |
| dna-3-methyladenine glycosylase 2 family protein | VAPA_RS19010 | Not Available | Positive | 4065559 - 4067160 | 56783.1 |
| methylated-dna--[protein]-cysteine s-methyltransferase | VAPA_RS19015 | Not Available | Positive | 4067167 - 4067661 | 17517.9 |
| dmt family transporter | VAPA_RS19020 | Not Available | Positive | 4067689 - 4068657 | 33357.5 |
| duf1345 domain-containing protein | VAPA_RS19025 | Not Available | Negative | 4068632 - 4069285 | 23775.1 |
| hypothetical protein | VAPA_RS19030 | Not Available | Positive | 4069498 - 4070337 | 29769.4 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | VAPA_RS19035 | Not Available | Positive | 4070403 - 4071287 | 31170.6 |
| glutathione s-transferase n-terminal domain-containing protein | VAPA_RS19040 | Not Available | Positive | 4071333 - 4072037 | 26065.6 |
| rna polymerase sigma factor | VAPA_RS19045 | Not Available | Positive | 4072277 - 4072897 | 23489.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
