Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | VAPA_RS18950 | Not Available | Negative | 4053368 - 4054579 | 44172.8 |
| hypothetical protein | VAPA_RS18955 | Not Available | Positive | 4054598 - 4054918 | 10109.7 |
| aec family transporter | VAPA_RS18960 | Not Available | Negative | 4055008 - 4055958 | 33577.7 |
| tonb-dependent receptor | VAPA_RS18965 | Not Available | Negative | 4056032 - 4058140 | 75278.0 |
| hypothetical protein | VAPA_RS18970 | Not Available | Negative | 4058218 - 4058616 | 13864.6 |
| peptide-methionine (s)-s-oxide reductase msra | VAPA_RS18975 | Not Available | Negative | 4058643 - 4059194 | 19941.2 |
| tetr/acrr family transcriptional regulator | VAPA_RS18980 | Not Available | Positive | 4059295 - 4059972 | 25406.8 |
| protein-l-isoaspartate o-methyltransferase family protein | VAPA_RS18985 | Not Available | Positive | 4060063 - 4060740 | 24688.9 |
| rhodanese-like domain-containing protein | VAPA_RS18990 | Not Available | Positive | 4060755 - 4061093 | 12174.4 |
| tolc family outer membrane protein | VAPA_RS18995 | Not Available | Positive | 4061115 - 4062653 | 54043.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
