Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS18900 | Not Available | Positive | 4044525 - 4045682 | 42289.4 |
| acyltransferase family protein | VAPA_RS18905 | Not Available | Positive | 4045679 - 4046740 | 38587.2 |
| haloacid dehalogenase type ii | VAPA_RS18910 | Not Available | Negative | 4046753 - 4047481 | 26435.7 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | VAPA_RS18915 | Not Available | Negative | 4047489 - 4048124 | 21877.5 |
| phosphogluconate dehydratase | VAPA_RS18920 | Not Available | Negative | 4048141 - 4049967 | 64241.2 |
| ompa family protein | VAPA_RS18925 | Not Available | Negative | 4050124 - 4050675 | 18677.4 |
| gamma-glutamylcyclotransferase | VAPA_RS18930 | Not Available | Positive | 4050832 - 4051527 | 26003.9 |
| superoxide dismutase family protein | VAPA_RS18935 | Not Available | Positive | 4051524 - 4052066 | 18139.4 |
| ntp transferase domain-containing protein | VAPA_RS18940 | Not Available | Negative | 4052071 - 4052640 | 19192.2 |
| pyridoxamine 5'-phosphate oxidase | VAPA_RS18945 | Not Available | Positive | 4052687 - 4053361 | 25315.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
