Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | VAPA_RS18850 | Not Available | Negative | 4034918 - 4036294 | 47201.3 |
| mfs transporter | VAPA_RS18855 | Not Available | Negative | 4036380 - 4037615 | 41820.6 |
| marr family winged helix-turn-helix transcriptional regulator | VAPA_RS18860 | Not Available | Negative | 4037608 - 4038102 | 17967.6 |
| paai family thioesterase | VAPA_RS18865 | Not Available | Positive | 4038157 - 4038702 | 19161.4 |
| nitroreductase | VAPA_RS18870 | Not Available | Positive | 4038720 - 4039415 | 25537.9 |
| fe(3+) abc transporter substrate-binding protein | VAPA_RS18875 | Not Available | Positive | 4039532 - 4040593 | 37557.1 |
| abc transporter permease | VAPA_RS18880 | Not Available | Positive | 4040694 - 4042304 | 56107.9 |
| abc transporter atp-binding protein | VAPA_RS18885 | Not Available | Positive | 4042301 - 4042984 | 24491.7 |
| glutathione s-transferase family protein | VAPA_RS18890 | Not Available | Positive | 4043090 - 4043767 | 25402.5 |
| lactoylglutathione lyase | VAPA_RS18895 | Not Available | Positive | 4043812 - 4044252 | 15593.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
