Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | VAPA_RS18800 | Not Available | Negative | 4025447 - 4026298 | 31589.2 |
| carbohydrate abc transporter permease | VAPA_RS18805 | Not Available | Negative | 4026295 - 4027170 | 32473.5 |
| abc transporter substrate-binding protein | VAPA_RS18810 | Not Available | Negative | 4027207 - 4028592 | 51869.6 |
| fadr/gntr family transcriptional regulator | VAPA_RS18815 | Not Available | Negative | 4028695 - 4029438 | 27096.9 |
| ilvd/edd family dehydratase | VAPA_RS18820 | Not Available | Positive | 4029590 - 4031326 | 63024.2 |
| 2-dehydro-3-deoxygalactonokinase | VAPA_RS18825 | Not Available | Positive | 4031328 - 4032236 | 32301.1 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | VAPA_RS18830 | Not Available | Positive | 4032233 - 4032874 | 21878.7 |
| yran family protein | VAPA_RS18835 | Not Available | Positive | 4032905 - 4033645 | 26720.1 |
| hypothetical protein | VAPA_RS18840 | Not Available | Positive | 4033804 - 4034130 | 12684.8 |
| sdr family oxidoreductase | VAPA_RS18845 | Not Available | Negative | 4034146 - 4034856 | 23656.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
