Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | VAPA_RS18700 | Not Available | Positive | 4006136 - 4006906 | 27886.2 |
| duf72 domain-containing protein | VAPA_RS18705 | Not Available | Negative | 4006926 - 4007891 | 36149.5 |
| lysr family transcriptional regulator | VAPA_RS18710 | Not Available | Positive | 4008001 - 4008894 | 33321.4 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS18715 | Not Available | Positive | 4008993 - 4009973 | 33941.2 |
| succinylglutamate desuccinylase/aspartoacylase family protein | VAPA_RS18720 | Not Available | Positive | 4009970 - 4010941 | 35421.0 |
| duf1439 domain-containing protein | VAPA_RS18725 | Not Available | Positive | 4010986 - 4011570 | 21230.7 |
| glycerophosphodiester phosphodiesterase | VAPA_RS18730 | Not Available | Positive | 4011567 - 4012601 | 36597.9 |
| hypothetical protein | VAPA_RS18735 | Not Available | Positive | 4012598 - 4012876 | 9942.71 |
| duf411 domain-containing protein | VAPA_RS18740 | Not Available | Positive | 4012888 - 4013355 | 16481.9 |
| nad(p)/fad-dependent oxidoreductase | VAPA_RS18745 | Not Available | Negative | 4013385 - 4014683 | 45458.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
