Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylglutamate desuccinylase/aspartoacylase family protein | VAPA_RS18455 | Not Available | Negative | 3963126 - 3964061 | 34087.8 |
| ammonium transporter | VAPA_RS18460 | Not Available | Negative | 3964282 - 3965484 | 41918.5 |
| lyttr family dna-binding domain-containing protein | VAPA_RS18465 | Not Available | Negative | 3965662 - 3966561 | 33747.8 |
| acyltransferase family protein | VAPA_RS18470 | Not Available | Positive | 3966692 - 3967933 | 46838.3 |
| paai family thioesterase | VAPA_RS18475 | Not Available | Negative | 3967869 - 3968288 | 14583.6 |
| duf4139 domain-containing protein | VAPA_RS18480 | Not Available | Positive | 3968510 - 3970135 | 57399.0 |
| fur family transcriptional regulator | VAPA_RS18485 | Not Available | Negative | 3970150 - 3970599 | 16287.6 |
| ribosome biogenesis gtpase ylqf | VAPA_RS18490 | Not Available | Negative | 3970635 - 3971606 | 34977.2 |
| outer membrane protein assembly factor bame | VAPA_RS18495 | Not Available | Positive | 3971814 - 3972413 | 21732.1 |
| cbs domain-containing protein | VAPA_RS18500 | Not Available | Positive | 3972569 - 3972997 | 15935.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
