Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | VAPA_RS18405 | Not Available | Negative | 3951813 - 3954920 | 110084.0 |
| efflux rnd transporter periplasmic adaptor subunit | VAPA_RS18410 | Not Available | Negative | 3954970 - 3956286 | 46130.1 |
| duf6622 family protein | VAPA_RS18415 | Not Available | Positive | 3956513 - 3957034 | 18312.0 |
| 2tm domain-containing protein | VAPA_RS18420 | Not Available | Positive | 3957091 - 3957387 | 10813.2 |
| sensor histidine kinase | VAPA_RS18425 | Not Available | Positive | 3957461 - 3958531 | 39047.7 |
| lytr/algr family response regulator transcription factor | VAPA_RS18430 | Not Available | Positive | 3958528 - 3959376 | 30590.9 |
| hypothetical protein | VAPA_RS18435 | Not Available | Negative | 3959460 - 3959819 | 12782.2 |
| glutamine--trna ligase/yqey domain fusion protein | VAPA_RS18440 | Not Available | Positive | 3959954 - 3961768 | 67385.4 |
| hypothetical protein | VAPA_RS18445 | Not Available | Negative | 3961824 - 3962126 | 10287.4 |
| m23 family metallopeptidase | VAPA_RS18450 | Not Available | Positive | 3962191 - 3963084 | 31405.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
