Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS18355 | Not Available | Negative | 3939662 - 3940630 | 33377.6 |
| iclr family transcriptional regulator | VAPA_RS18360 | Not Available | Positive | 3940758 - 3941585 | 29080.1 |
| undecaprenyl-diphosphate phosphatase | VAPA_RS18365 | Not Available | Negative | 3941602 - 3942426 | 29802.3 |
| aspartate/glutamate racemase family protein | VAPA_RS18370 | Not Available | Negative | 3942507 - 3943163 | 22987.8 |
| transporter substrate-binding domain-containing protein | VAPA_RS18375 | Not Available | Negative | 3943177 - 3944091 | 33256.2 |
| aspartate aminotransferase family protein | VAPA_RS18380 | Not Available | Negative | 3944154 - 3945488 | 47042.4 |
| murr/rpir family transcriptional regulator | VAPA_RS18385 | Not Available | Positive | 3945636 - 3946502 | 31088.3 |
| spw repeat protein | VAPA_RS18390 | Not Available | Positive | 3946610 - 3946975 | 12957.0 |
| efflux transporter outer membrane subunit | VAPA_RS18395 | Not Available | Negative | 3947072 - 3948562 | 51896.1 |
| efflux rnd transporter permease subunit | VAPA_RS18400 | Not Available | Negative | 3948574 - 3951816 | 115075.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
