Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | VAPA_RS18305 | Not Available | Negative | 3926948 - 3928420 | 52537.5 |
| azld domain-containing protein | VAPA_RS18310 | Not Available | Negative | 3928456 - 3928800 | 12519.6 |
| azlc family abc transporter permease | VAPA_RS18315 | Not Available | Negative | 3928800 - 3929540 | 25757.7 |
| dipeptide abc transporter atp-binding protein | VAPA_RS18320 | Not Available | Negative | 3929537 - 3931174 | 59237.2 |
| abc transporter permease | VAPA_RS18325 | Not Available | Negative | 3931188 - 3932060 | 30692.2 |
| abc transporter permease | VAPA_RS18330 | Not Available | Negative | 3932075 - 3933016 | 33844.5 |
| abc transporter substrate-binding protein | VAPA_RS18335 | Not Available | Negative | 3933029 - 3934660 | 59921.6 |
| plp-dependent aminotransferase family protein | VAPA_RS18340 | Not Available | Positive | 3934828 - 3936252 | 52357.6 |
| response regulator transcription factor | VAPA_RS18345 | Not Available | Positive | 3936510 - 3937178 | 23782.5 |
| cytochrome p450/oxidoreductase | VAPA_RS18350 | Not Available | Negative | 3937185 - 3939533 | 87170.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
