Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c peroxidase | VAPA_RS18255 | Not Available | Positive | 3916332 - 3917747 | 48608.2 |
| hypothetical protein | VAPA_RS18260 | Not Available | Positive | 3917768 - 3918382 | 22212.6 |
| 2og-fe(ii) oxygenase | VAPA_RS18265 | Not Available | Positive | 3918387 - 3919277 | 31919.0 |
| padr family transcriptional regulator | VAPA_RS18270 | Not Available | Positive | 3919378 - 3919977 | 21487.6 |
| siderophore-interacting protein | VAPA_RS18275 | Not Available | Positive | 3919993 - 3920832 | 30567.1 |
| magnesium and cobalt transport protein cora | VAPA_RS18280 | Not Available | Negative | 3920849 - 3921826 | 36469.8 |
| hypothetical protein | VAPA_RS18285 | Not Available | Negative | 3921863 - 3922489 | 21934.2 |
| dna mismatch repair protein muts | VAPA_RS18290 | Not Available | Positive | 3922592 - 3925243 | 95536.5 |
| proteasome-type protease | VAPA_RS18295 | Not Available | Positive | 3925272 - 3926111 | 31156.2 |
| alpha/beta hydrolase | VAPA_RS18300 | Not Available | Positive | 3926126 - 3926932 | 29920.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
