Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspl | VAPA_RS35205 | Not Available | Negative | 3879624 - 3879785 | 5900.04 |
| cusa/czca family heavy metal efflux rnd transporter | VAPA_RS18110 | Not Available | Negative | 3879877 - 3883080 | 115474.0 |
| efflux rnd transporter periplasmic adaptor subunit | VAPA_RS18115 | Not Available | Negative | 3883091 - 3884458 | 48907.6 |
| tolc family protein | VAPA_RS18120 | Not Available | Negative | 3884481 - 3885818 | 47232.0 |
| cation efflux protein, czci family | VAPA_RS18125 | Not Available | Negative | 3885917 - 3886288 | 13514.1 |
| heavy metal response regulator transcription factor | VAPA_RS18130 | Not Available | Positive | 3886451 - 3887128 | 25619.1 |
| heavy metal sensor histidine kinase | VAPA_RS18135 | Not Available | Positive | 3887125 - 3888456 | 48146.7 |
| cation:proton antiporter | VAPA_RS18140 | Not Available | Negative | 3888464 - 3889726 | 43490.0 |
| winged helix-turn-helix transcriptional regulator | VAPA_RS18145 | Not Available | Negative | 3889762 - 3890100 | 12551.9 |
| carboxymuconolactone decarboxylase family protein | VAPA_RS18150 | Not Available | Positive | 3890221 - 3890799 | 21249.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
