Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | VAPA_RS18005 | Not Available | Positive | 3861014 - 3862255 | 44119.8 |
| 30s ribosomal protein s21 | VAPA_RS18010 | Not Available | Positive | 3862366 - 3862578 | 8506.61 |
| gatb/yqey domain-containing protein | VAPA_RS18015 | Not Available | Positive | 3862689 - 3863138 | 15873.5 |
| nudix domain-containing protein | VAPA_RS18020 | Not Available | Positive | 3863138 - 3863608 | 16788.1 |
| sulfite exporter taue/safe family protein | VAPA_RS18025 | Not Available | Negative | 3863631 - 3864398 | 26189.1 |
| lysr family transcriptional regulator | VAPA_RS18030 | Not Available | Positive | 3864501 - 3865406 | 33056.3 |
| nucleoside 2-deoxyribosyltransferase | VAPA_RS18035 | Not Available | Negative | 3865434 - 3865976 | 19013.7 |
| duf4242 domain-containing protein | VAPA_RS18040 | Not Available | Positive | 3866048 - 3866323 | 10126.2 |
| cupin domain-containing protein | VAPA_RS18045 | Not Available | Negative | 3866357 - 3866827 | 16846.4 |
| group i truncated hemoglobin | VAPA_RS18050 | Not Available | Negative | 3866894 - 3867253 | 13170.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
