Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | VAPA_RS17960 | Not Available | Positive | 3850247 - 3851053 | 27432.0 |
| hypothetical protein | VAPA_RS17965 | Not Available | Negative | 3851059 - 3852138 | 37687.0 |
| type iv pilus secretin family protein | VAPA_RS17970 | Not Available | Positive | 3852372 - 3854468 | 74497.0 |
| abc transporter atp-binding protein | VAPA_RS17975 | Not Available | Positive | 3854545 - 3855657 | 39054.2 |
| potd/potf family extracellular solute-binding protein | VAPA_RS17980 | Not Available | Positive | 3855743 - 3857011 | 46082.5 |
| abc transporter permease | VAPA_RS17985 | Not Available | Positive | 3857016 - 3857933 | 33705.1 |
| hypothetical protein | VAPA_RS34515 | Not Available | Positive | 3857934 - 3858107 | 6326.64 |
| abc transporter permease | VAPA_RS17990 | Not Available | Positive | 3858104 - 3858994 | 31664.5 |
| sterol desaturase family protein | VAPA_RS17995 | Not Available | Positive | 3859102 - 3860226 | 42553.2 |
| yaef family permuted papain-like enzyme | VAPA_RS18000 | Not Available | Positive | 3860223 - 3861008 | 27715.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
