Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cmpa/nrta family abc transporter substrate-binding protein | VAPA_RS17910 | Not Available | Positive | 3835788 - 3837032 | 45323.0 |
| nitrate abc transporter permease | VAPA_RS17915 | Not Available | Positive | 3837043 - 3837972 | 33314.3 |
| abc transporter atp-binding protein | VAPA_RS17920 | Not Available | Positive | 3837969 - 3838778 | 29190.7 |
| antar domain-containing protein | VAPA_RS17925 | Not Available | Negative | 3838919 - 3840220 | 46222.7 |
| mfs transporter | VAPA_RS17930 | Not Available | Positive | 3840478 - 3841746 | 44557.5 |
| bifunctional protein-serine/threonine kinase/phosphatase | VAPA_RS17935 | Not Available | Negative | 3841764 - 3843464 | 61235.7 |
| nitrite reductase large subunit nirb | VAPA_RS17940 | Not Available | Positive | 3843530 - 3846013 | 90650.9 |
| nitrite reductase small subunit nird | VAPA_RS17945 | Not Available | Positive | 3846028 - 3846480 | 15916.8 |
| nitrate reductase | VAPA_RS17950 | Not Available | Positive | 3846502 - 3849297 | 100274.0 |
| dna-binding protein ybib | VAPA_RS17955 | Not Available | Positive | 3849345 - 3850250 | 32319.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
