Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine zipper domain-containing protein | VAPA_RS17610 | Not Available | Positive | 3770267 - 3770557 | 9724.54 |
| deda family protein | VAPA_RS17615 | Not Available | Negative | 3770613 - 3771281 | 24752.8 |
| dienelactone hydrolase family protein | VAPA_RS17620 | Not Available | Positive | 3771343 - 3772560 | 44233.7 |
| dna mismatch repair endonuclease mutl | VAPA_RS17625 | Not Available | Positive | 3772616 - 3774505 | 67859.8 |
| alpha/beta hydrolase | VAPA_RS17630 | Not Available | Positive | 3774693 - 3775691 | 36127.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | VAPA_RS17635 | Not Available | Positive | 3775738 - 3776727 | 35044.1 |
| abc transporter atp-binding protein | VAPA_RS17640 | Not Available | Positive | 3776724 - 3777371 | 22866.7 |
| threo-3-hydroxy-l-aspartate ammonia-lyase | VAPA_RS17645 | Not Available | Negative | 3777373 - 3778329 | 34010.8 |
| gntr family transcriptional regulator | VAPA_RS17650 | Not Available | Positive | 3778443 - 3779147 | 25590.7 |
| phytanoyl-coa dioxygenase family protein | VAPA_RS17655 | Not Available | Positive | 3779144 - 3780019 | 32873.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
