Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase | VAPA_RS17560 | Not Available | Negative | 3760646 - 3761122 | 17095.5 |
| thiolase family protein | VAPA_RS17565 | Not Available | Negative | 3761162 - 3762295 | 38639.5 |
| tetr/acrr family transcriptional regulator | VAPA_RS17570 | Not Available | Negative | 3762390 - 3762980 | 21159.3 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS17575 | Not Available | Negative | 3763025 - 3763981 | 32257.0 |
| site-specific tyrosine recombinase xerd | VAPA_RS17580 | Not Available | Negative | 3764029 - 3764940 | 33857.0 |
| tripartite tricarboxylate transporter substrate binding protein buge | VAPA_RS17585 | Not Available | Negative | 3765008 - 3765982 | 34037.3 |
| aec family transporter | VAPA_RS17590 | Not Available | Positive | 3766085 - 3767002 | 32374.4 |
| trna epoxyqueuosine(34) reductase queg | VAPA_RS17595 | Not Available | Negative | 3767010 - 3768086 | 39469.3 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | VAPA_RS17600 | Not Available | Positive | 3768072 - 3768581 | 18501.9 |
| n-acetylmuramoyl-l-alanine amidase | VAPA_RS17605 | Not Available | Positive | 3768578 - 3770134 | 54254.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
