Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS17415 | Not Available | Negative | 3733891 - 3734079 | 7145.8 |
| dna topoisomerase iv subunit a | VAPA_RS17420 | Not Available | Negative | 3734079 - 3736481 | 86250.5 |
| kelch repeat-containing protein | VAPA_RS17425 | Not Available | Negative | 3736528 - 3737649 | 39667.8 |
| lytic transglycosylase domain-containing protein | VAPA_RS17430 | Not Available | Negative | 3737690 - 3738580 | 31173.4 |
| dna topoisomerase iv subunit b | VAPA_RS17435 | Not Available | Negative | 3738607 - 3740604 | 72293.3 |
| mfs transporter | VAPA_RS17440 | Not Available | Positive | 3740784 - 3742007 | 43020.5 |
| hypothetical protein | VAPA_RS34880 | Not Available | Positive | 3742030 - 3742170 | 5079.26 |
| class i sam-dependent methyltransferase | VAPA_RS17445 | Not Available | Positive | 3742176 - 3742745 | 20091.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | VAPA_RS17450 | Not Available | Positive | 3742825 - 3743715 | 31954.8 |
| outer membrane protein assembly factor bamc | VAPA_RS17455 | Not Available | Positive | 3743855 - 3744949 | 39972.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
