Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | VAPA_RS17365 | Not Available | Negative | 3723848 - 3724801 | 33731.0 |
| sugar phosphate isomerase/epimerase family protein | VAPA_RS17370 | Not Available | Negative | 3724812 - 3725555 | 26592.9 |
| amino acid abc transporter atp-binding protein | VAPA_RS17375 | Not Available | Negative | 3725555 - 3726310 | 27778.0 |
| transporter substrate-binding domain-containing protein | VAPA_RS17380 | Not Available | Negative | 3726343 - 3727140 | 28122.0 |
| amino acid abc transporter permease | VAPA_RS17385 | Not Available | Negative | 3727187 - 3727840 | 23482.4 |
| amino acid abc transporter permease | VAPA_RS17390 | Not Available | Negative | 3727868 - 3728539 | 24849.9 |
| hypothetical protein | VAPA_RS17395 | Not Available | Positive | 3728676 - 3730376 | 64560.9 |
| isochorismatase family protein | VAPA_RS17400 | Not Available | Negative | 3730377 - 3730907 | 19204.7 |
| esterase/lipase family protein | VAPA_RS17405 | Not Available | Negative | 3730977 - 3732569 | 58617.3 |
| mbl fold metallo-hydrolase | VAPA_RS17410 | Not Available | Positive | 3732770 - 3733894 | 42123.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
