Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2126 domain-containing protein | VAPA_RS17265 | Not Available | Positive | 3700183 - 3703722 | 131415.0 |
| circularly permuted type 2 atp-grasp protein | VAPA_RS17270 | Not Available | Positive | 3703806 - 3706544 | 98906.0 |
| transglutaminase n-terminal domain-containing protein | VAPA_RS17275 | Not Available | Positive | 3706593 - 3707597 | 36676.8 |
| rida family protein | VAPA_RS17280 | Not Available | Positive | 3707594 - 3708052 | 15787.2 |
| pas domain s-box protein | VAPA_RS17285 | Not Available | Positive | 3708313 - 3709374 | 38977.8 |
| response regulator transcription factor | VAPA_RS17290 | Not Available | Positive | 3709371 - 3710003 | 22833.0 |
| carboxylesterase/lipase family protein | VAPA_RS17295 | Not Available | Negative | 3710018 - 3711769 | 63814.9 |
| hypothetical protein | VAPA_RS17300 | Not Available | Negative | 3711962 - 3712639 | 24009.6 |
| hypothetical protein | VAPA_RS17305 | Not Available | Negative | 3712633 - 3712974 | 11481.9 |
| hypothetical protein | VAPA_RS17310 | Not Available | Negative | 3712971 - 3713900 | 33466.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
