Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | VAPA_RS17210 | Not Available | Negative | 3687252 - 3688322 | 38903.1 |
| abc transporter atp-binding protein | VAPA_RS17215 | Not Available | Negative | 3688325 - 3689398 | 37850.8 |
| glycerol-3-phosphate dehydrogenase | VAPA_RS17220 | Not Available | Negative | 3689398 - 3691071 | 61836.5 |
| deor/glpr family dna-binding transcription regulator | VAPA_RS17225 | Not Available | Positive | 3691193 - 3691960 | 27853.5 |
| glycerol kinase glpk | VAPA_RS17235 | Not Available | Positive | 3692312 - 3693805 | 53413.9 |
| sh3 domain-containing protein | VAPA_RS17240 | Not Available | Negative | 3693826 - 3694287 | 17464.3 |
| hypothetical protein | VAPA_RS17245 | Not Available | Positive | 3694492 - 3694944 | 16663.1 |
| alpha-e domain-containing protein | VAPA_RS17250 | Not Available | Negative | 3695018 - 3695974 | 36640.4 |
| circularly permuted type 2 atp-grasp protein | VAPA_RS17255 | Not Available | Negative | 3695986 - 3697479 | 55682.9 |
| dna internalization-related competence protein comec/rec2 | VAPA_RS17260 | Not Available | Negative | 3697571 - 3700042 | 88550.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
