Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | VAPA_RS17110 | Not Available | Negative | 3666935 - 3668215 | 46274.1 |
| histone deacetylase family protein | VAPA_RS17115 | Not Available | Negative | 3668257 - 3669210 | 35160.8 |
| aaa family atpase | VAPA_RS17120 | Not Available | Positive | 3669297 - 3670217 | 33020.0 |
| duf58 domain-containing protein | VAPA_RS17125 | Not Available | Positive | 3670245 - 3671216 | 35379.9 |
| transglutaminasetgpa domain-containing protein | VAPA_RS17130 | Not Available | Positive | 3671260 - 3673281 | 73587.3 |
| lytic murein transglycosylase b | VAPA_RS17135 | Not Available | Positive | 3673334 - 3674425 | 39497.1 |
| hypothetical protein | VAPA_RS17140 | Not Available | Positive | 3674429 - 3675055 | 23537.8 |
| hypothetical protein | VAPA_RS17145 | Not Available | Negative | 3675087 - 3675599 | 18352.1 |
| beta-ketoacyl synthase n-terminal-like domain-containing protein | VAPA_RS17150 | Not Available | Negative | 3675596 - 3676675 | 36345.6 |
| acyl carrier protein | VAPA_RS17155 | Not Available | Negative | 3676698 - 3676976 | 9909.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
