Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS16965 | Not Available | Positive | 3636780 - 3637232 | 15663.7 |
| rok family protein | VAPA_RS16970 | Not Available | Negative | 3637285 - 3638514 | 43431.2 |
| atp-binding cassette domain-containing protein | VAPA_RS16975 | Not Available | Negative | 3638507 - 3639304 | 28627.2 |
| yran family protein | VAPA_RS16980 | Not Available | Negative | 3639304 - 3640264 | 33385.9 |
| sugar abc transporter substrate-binding protein | VAPA_RS16985 | Not Available | Negative | 3640281 - 3641285 | 34157.3 |
| yran family protein | VAPA_RS35190 | Not Available | Negative | 3641476 - 3641682 | 7796.02 |
| pentapeptide repeat-containing protein | VAPA_RS35195 | Not Available | Negative | 3641695 - 3641979 | 10046.6 |
| lamg-like jellyroll fold domain-containing protein | VAPA_RS16995 | Not Available | Negative | 3642331 - 3644490 | 77271.8 |
| mfs transporter | VAPA_RS17000 | Not Available | Negative | 3644603 - 3645796 | 42849.2 |
| chorismate synthase | VAPA_RS17005 | Not Available | Negative | 3645796 - 3646908 | 39505.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
