Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator c-terminal domain-containing protein | VAPA_RS16915 | Not Available | Positive | 3627731 - 3628525 | 29027.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS16920 | Not Available | Positive | 3628599 - 3629609 | 35572.8 |
| response regulator | VAPA_RS16925 | Not Available | Positive | 3629635 - 3630300 | 24693.8 |
| sensor histidine kinase | VAPA_RS16930 | Not Available | Positive | 3630314 - 3631720 | 50409.4 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS16935 | Not Available | Positive | 3631738 - 3632757 | 35301.3 |
| duf6194 family protein | VAPA_RS16940 | Not Available | Positive | 3632778 - 3633182 | 14981.8 |
| lysr family transcriptional regulator | VAPA_RS16945 | Not Available | Negative | 3633208 - 3634281 | 40047.2 |
| hypothetical protein | VAPA_RS16950 | Not Available | Positive | 3634283 - 3634834 | 20318.1 |
| alpha/beta fold hydrolase | VAPA_RS16955 | Not Available | Positive | 3634831 - 3635637 | 28511.7 |
| tripartite tricarboxylate transporter substrate binding protein | VAPA_RS16960 | Not Available | Positive | 3635668 - 3636654 | 34983.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
