Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein | VAPA_RS16865 | Not Available | Negative | 3617041 - 3618933 | 68749.9 |
| alpha/beta fold hydrolase | VAPA_RS16870 | Not Available | Negative | 3619075 - 3619839 | 27096.4 |
| mfs transporter | VAPA_RS16875 | Not Available | Negative | 3619836 - 3621053 | 42496.9 |
| carboxymuconolactone decarboxylase family protein | VAPA_RS16880 | Not Available | Negative | 3621050 - 3621478 | 15851.9 |
| 3-carboxy-cis,cis-muconate cycloisomerase | VAPA_RS16885 | Not Available | Negative | 3621475 - 3622686 | 42300.9 |
| shikimate dehydrogenase family protein | VAPA_RS16890 | Not Available | Negative | 3622784 - 3623617 | 28986.1 |
| trap transporter substrate-binding protein | VAPA_RS16895 | Not Available | Negative | 3623646 - 3624656 | 36609.5 |
| trap transporter large permease subunit | VAPA_RS16900 | Not Available | Negative | 3624708 - 3625988 | 44842.4 |
| trap transporter small permease | VAPA_RS16905 | Not Available | Negative | 3626004 - 3626564 | 20280.9 |
| shikimate dehydrogenase family protein | VAPA_RS16910 | Not Available | Negative | 3626607 - 3627530 | 32915.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
