Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-erythronate dehydrogenase | VAPA_RS16765 | Not Available | Positive | 3594983 - 3595999 | 35617.8 |
| trap transporter substrate-binding protein | VAPA_RS16770 | Not Available | Positive | 3596064 - 3597035 | 35132.4 |
| trap transporter small permease | VAPA_RS16775 | Not Available | Positive | 3597120 - 3597614 | 18557.4 |
| trap transporter large permease | VAPA_RS16780 | Not Available | Positive | 3597611 - 3598888 | 44997.3 |
| hypothetical protein | VAPA_RS16785 | Not Available | Positive | 3599027 - 3599572 | 20244.5 |
| glycine cleavage system aminomethyltransferase gcvt | VAPA_RS16790 | Not Available | Positive | 3599866 - 3601044 | 41478.0 |
| glycine cleavage system protein gcvh | VAPA_RS16795 | Not Available | Positive | 3601085 - 3601456 | 12915.1 |
| aminomethyl-transferring glycine dehydrogenase | VAPA_RS16800 | Not Available | Positive | 3601507 - 3604413 | 104160.0 |
| hypothetical protein | VAPA_RS16805 | Not Available | Negative | 3604431 - 3604679 | 9139.77 |
| duf3014 domain-containing protein | VAPA_RS16810 | Not Available | Negative | 3604809 - 3605747 | 34476.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
