Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | VAPA_RS16665 | Not Available | Negative | 3571786 - 3572172 | 13344.9 |
| ethanolamine permease | VAPA_RS16670 | Not Available | Positive | 3572315 - 3573736 | 50242.2 |
| ethanolamine ammonia-lyase subunit eutb | VAPA_RS16675 | Not Available | Positive | 3573747 - 3575141 | 49934.1 |
| ethanolamine ammonia-lyase subunit eutc | VAPA_RS16680 | Not Available | Positive | 3575138 - 3575926 | 28147.8 |
| helix-turn-helix domain-containing protein | VAPA_RS16685 | Not Available | Positive | 3576049 - 3576339 | 10397.6 |
| type ii toxin-antitoxin system hipa family toxin | VAPA_RS16690 | Not Available | Positive | 3576329 - 3577591 | 46395.4 |
| haloacid dehalogenase-like hydrolase | VAPA_RS16695 | Not Available | Positive | 3577697 - 3578965 | 46286.2 |
| peroxidase-related enzyme | VAPA_RS16700 | Not Available | Positive | 3579028 - 3579606 | 21746.1 |
| phosphoethanolamine transferase | VAPA_RS16705 | Not Available | Negative | 3579620 - 3581371 | 64236.2 |
| phosphatase pap2 family protein | VAPA_RS16710 | Not Available | Negative | 3581429 - 3581998 | 20447.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
