Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS34875 | Not Available | Positive | 3561679 - 3561825 | 5011.31 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS16620 | Not Available | Negative | 3561835 - 3562806 | 34275.5 |
| voc family protein | VAPA_RS16625 | Not Available | Negative | 3562852 - 3563232 | 14007.0 |
| hydroxymethylglutaryl-coa lyase | VAPA_RS16630 | Not Available | Negative | 3563229 - 3564212 | 35273.5 |
| caib/baif coa transferase family protein | VAPA_RS16635 | Not Available | Negative | 3564209 - 3565384 | 42042.4 |
| lysr family transcriptional regulator | VAPA_RS16640 | Not Available | Positive | 3565499 - 3566410 | 32636.7 |
| lysr family transcriptional regulator | VAPA_RS16645 | Not Available | Negative | 3566440 - 3567390 | 34824.0 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | VAPA_RS16650 | Not Available | Positive | 3567494 - 3569002 | 53926.1 |
| class i sam-dependent methyltransferase | VAPA_RS16655 | Not Available | Positive | 3569109 - 3569951 | 31434.9 |
| glucan biosynthesis protein | VAPA_RS16660 | Not Available | Positive | 3570169 - 3571767 | 59213.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
