Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | VAPA_RS16570 | Not Available | Negative | 3552371 - 3553486 | 40745.8 |
| acyl-coa dehydrogenase family protein | VAPA_RS16575 | Not Available | Negative | 3553515 - 3554669 | 41030.7 |
| lysozyme inhibitor lpri family protein | VAPA_RS16580 | Not Available | Negative | 3554666 - 3555055 | 14242.9 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | VAPA_RS16585 | Not Available | Negative | 3555052 - 3556575 | 53927.1 |
| lysr family transcriptional regulator | VAPA_RS16590 | Not Available | Positive | 3556715 - 3557608 | 33096.1 |
| hypothetical protein | VAPA_RS16595 | Not Available | Negative | 3557622 - 3557954 | 12824.1 |
| coa transferase | VAPA_RS16600 | Not Available | Negative | 3557967 - 3559373 | 49594.9 |
| 3-oxoacid coa-transferase subunit b | VAPA_RS16605 | Not Available | Negative | 3559456 - 3560094 | 22505.6 |
| coa transferase subunit a | VAPA_RS16610 | Not Available | Negative | 3560096 - 3560899 | 28073.8 |
| luxr c-terminal-related transcriptional regulator | VAPA_RS16615 | Not Available | Positive | 3561001 - 3561567 | 20733.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
