Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2894 domain-containing protein | VAPA_RS16475 | Not Available | Negative | 3533236 - 3533877 | 23485.9 |
| ompa family protein | VAPA_RS16480 | Not Available | Negative | 3533888 - 3534544 | 23238.7 |
| duf802 domain-containing protein | VAPA_RS16485 | Not Available | Negative | 3534544 - 3536634 | 74014.9 |
| duf3348 domain-containing protein | VAPA_RS16490 | Not Available | Negative | 3536627 - 3537319 | 25159.4 |
| duf2867 domain-containing protein | VAPA_RS16495 | Not Available | Negative | 3537441 - 3537974 | 19319.2 |
| hypothetical protein | VAPA_RS16500 | Not Available | Negative | 3537971 - 3538198 | 8668.25 |
| nudix hydrolase | VAPA_RS16505 | Not Available | Negative | 3538195 - 3538635 | 16395.5 |
| dna-3-methyladenine glycosylase i | VAPA_RS16510 | Not Available | Positive | 3538737 - 3539312 | 21143.4 |
| hypothetical protein | VAPA_RS16515 | Not Available | Negative | 3539417 - 3539758 | 11321.2 |
| bifunctional 2-methylcitrate dehydratase/aconitate hydratase | VAPA_RS16520 | Not Available | Negative | 3540013 - 3541467 | 53362.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
