Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS16375 | Not Available | Positive | 3516162 - 3516371 | 7295.99 |
| duf2868 domain-containing protein | VAPA_RS16380 | Not Available | Positive | 3516515 - 3517927 | 50183.3 |
| gtpase/duf3482 domain-containing protein | VAPA_RS16385 | Not Available | Positive | 3517924 - 3519345 | 51133.9 |
| hypothetical protein | VAPA_RS16390 | Not Available | Positive | 3519490 - 3519849 | 13594.4 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | VAPA_RS16395 | Not Available | Negative | 3519859 - 3522099 | 78612.2 |
| fad binding domain-containing protein | VAPA_RS16400 | Not Available | Negative | 3522102 - 3523097 | 35291.2 |
| (2fe-2s)-binding protein | VAPA_RS16405 | Not Available | Negative | 3523090 - 3523752 | 22920.4 |
| doxx family protein | VAPA_RS16410 | Not Available | Negative | 3523778 - 3524233 | 16472.0 |
| lysr family transcriptional regulator | VAPA_RS16415 | Not Available | Positive | 3524377 - 3525288 | 33976.9 |
| paqr family membrane homeostasis protein trha | VAPA_RS16420 | Not Available | Positive | 3525382 - 3526002 | 22226.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
