Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS16275 | Not Available | Negative | 3492427 - 3493365 | 33602.6 |
| error-prone dna polymerase | VAPA_RS16280 | Not Available | Negative | 3493435 - 3496830 | 126771.0 |
| y-family dna polymerase | VAPA_RS16285 | Not Available | Negative | 3496823 - 3498172 | 50533.7 |
| translesion dna synthesis-associated protein imua | VAPA_RS16290 | Not Available | Negative | 3498141 - 3498947 | 28132.2 |
| aldo/keto reductase | VAPA_RS16295 | Not Available | Positive | 3499161 - 3500048 | 31851.3 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS16300 | Not Available | Negative | 3500062 - 3501039 | 34259.6 |
| porin | VAPA_RS16305 | Not Available | Negative | 3501059 - 3502186 | 39132.9 |
| dihydroxy-acid dehydratase | VAPA_RS16310 | Not Available | Negative | 3502304 - 3504007 | 59046.6 |
| aconitase x swivel domain-containing protein | VAPA_RS16315 | Not Available | Negative | 3504004 - 3504459 | 16335.6 |
| aconitase x | VAPA_RS16320 | Not Available | Negative | 3504456 - 3505751 | 47145.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
