Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | VAPA_RS16225 | Not Available | Positive | 3483228 - 3484325 | 41560.2 |
| hypothetical protein | VAPA_RS16230 | Not Available | Positive | 3484322 - 3485251 | 33337.9 |
| hypothetical protein | VAPA_RS16235 | Not Available | Positive | 3485262 - 3486194 | 34150.2 |
| lipopolysaccharide biosynthesis protein | VAPA_RS16240 | Not Available | Positive | 3486226 - 3487491 | 45311.0 |
| glycosyltransferase wbub | VAPA_RS16245 | Not Available | Positive | 3487488 - 3488723 | 44890.7 |
| luxr c-terminal-related transcriptional regulator | VAPA_RS16250 | Not Available | Positive | 3488784 - 3489572 | 29198.4 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | VAPA_RS16255 | Not Available | Positive | 3489606 - 3491111 | 53642.9 |
| hypothetical protein | VAPA_RS16260 | Not Available | Positive | 3491144 - 3491428 | 10064.6 |
| hypothetical protein | VAPA_RS16265 | Not Available | Positive | 3491449 - 3492057 | 22409.6 |
| hypothetical protein | VAPA_RS16270 | Not Available | Positive | 3492154 - 3492384 | 8489.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
