Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyketide synthase | VAPA_RS16175 | Not Available | Positive | 3461747 - 3469087 | 259364.0 |
| non-ribosomal peptide synthetase | VAPA_RS16180 | Not Available | Positive | 3469084 - 3474087 | 183085.0 |
| 4'-phosphopantetheinyl transferase family protein | VAPA_RS16185 | Not Available | Positive | 3474094 - 3474855 | 27513.8 |
| serine aminopeptidase domain-containing protein | VAPA_RS16190 | Not Available | Positive | 3474852 - 3475670 | 29970.7 |
| alpha/beta fold hydrolase | VAPA_RS16195 | Not Available | Positive | 3475663 - 3476601 | 34227.6 |
| polysaccharide biosynthesis/export family protein | VAPA_RS16200 | Not Available | Positive | 3476634 - 3477812 | 42188.2 |
| polysaccharide biosynthesis tyrosine autokinase | VAPA_RS16205 | Not Available | Positive | 3477855 - 3480149 | 82950.1 |
| sugar transferase | VAPA_RS16210 | Not Available | Positive | 3480146 - 3480808 | 24945.4 |
| gdp-l-fucose synthase family protein | VAPA_RS16215 | Not Available | Positive | 3480877 - 3481854 | 36066.2 |
| hypothetical protein | VAPA_RS16220 | Not Available | Positive | 3481897 - 3483219 | 46931.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
