Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS15990 | Not Available | Negative | 3422815 - 3423225 | 15191.4 |
| m1 family metallopeptidase | VAPA_RS15995 | Not Available | Negative | 3423234 - 3425453 | 81102.5 |
| porin | VAPA_RS16000 | Not Available | Negative | 3426115 - 3427221 | 38289.1 |
| pdr/vanb family oxidoreductase | VAPA_RS16005 | Not Available | Negative | 3427261 - 3428229 | 34905.8 |
| aromatic ring-hydroxylating oxygenase subunit alpha | VAPA_RS16010 | Not Available | Negative | 3428248 - 3429291 | 39626.2 |
| recombinase-like helix-turn-helix domain-containing protein | VAPA_RS16015 | Not Available | Negative | 3429305 - 3429526 | 8124.55 |
| fad-dependent monooxygenase | VAPA_RS16020 | Not Available | Negative | 3429559 - 3430722 | 40981.7 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS16025 | Not Available | Negative | 3430752 - 3431744 | 34386.9 |
| voc family protein | VAPA_RS16030 | Not Available | Negative | 3431762 - 3432733 | 35551.8 |
| aldehyde dehydrogenase | VAPA_RS16035 | Not Available | Negative | 3432730 - 3434208 | 52976.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
