Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | VAPA_RS15940 | Not Available | Positive | 3410493 - 3413888 | 123445.0 |
| response regulator transcription factor | VAPA_RS15945 | Not Available | Positive | 3413866 - 3414771 | 31426.1 |
| is701 family transposase | VAPA_RS15950 | Not Available | Negative | 3415320 - 3416732 | 53004.6 |
| aaa family atpase | VAPA_RS15955 | Not Available | Negative | 3416864 - 3417403 | 19380.7 |
| sensor histidine kinase | VAPA_RS15960 | Not Available | Negative | 3417441 - 3418592 | 41690.3 |
| duf1488 family protein | VAPA_RS15965 | Not Available | Positive | 3418718 - 3419002 | 10537.5 |
| dmt family transporter | VAPA_RS15970 | Not Available | Negative | 3418988 - 3419896 | 31239.8 |
| helix-turn-helix transcriptional regulator | VAPA_RS15975 | Not Available | Negative | 3419934 - 3420707 | 28500.4 |
| substrate-binding domain-containing protein | VAPA_RS15980 | Not Available | Positive | 3420843 - 3421661 | 28421.2 |
| transporter substrate-binding domain-containing protein | VAPA_RS15985 | Not Available | Positive | 3421729 - 3422490 | 26350.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
