Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase bglx | VAPA_RS15840 | Not Available | Positive | 3388224 - 3390497 | 81054.8 |
| yada family autotransporter adhesin | VAPA_RS15845 | Not Available | Negative | 3390532 - 3392241 | 55246.0 |
| phosphocholine-specific phospholipase c | VAPA_RS15850 | Not Available | Negative | 3392247 - 3394499 | 81717.5 |
| hypothetical protein | VAPA_RS34865 | Not Available | Negative | 3394553 - 3394720 | 4845.82 |
| phosphonate abc transporter, permease protein phne | VAPA_RS15860 | Not Available | Negative | 3394901 - 3395908 | 37102.7 |
| phosphonate abc transporter atp-binding protein | VAPA_RS15865 | Not Available | Negative | 3395905 - 3396726 | 28954.2 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | VAPA_RS15870 | Not Available | Negative | 3396735 - 3397670 | 32663.4 |
| had-iia family hydrolase | VAPA_RS15875 | Not Available | Positive | 3397854 - 3398729 | 30489.6 |
| murr/rpir family transcriptional regulator | VAPA_RS15880 | Not Available | Negative | 3398666 - 3399499 | 30293.5 |
| class i sam-dependent methyltransferase | VAPA_RS15885 | Not Available | Positive | 3399702 - 3400385 | 24595.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
