Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin family protein | VAPA_RS15740 | Not Available | Negative | 3369104 - 3369655 | 19447.9 |
| doxx family protein | VAPA_RS15745 | Not Available | Negative | 3369710 - 3370129 | 14525.2 |
| pirin family protein | VAPA_RS15750 | Not Available | Negative | 3370213 - 3370914 | 25277.8 |
| lysr family transcriptional regulator | VAPA_RS15755 | Not Available | Positive | 3371087 - 3372040 | 34083.2 |
| nad(p)/fad-dependent oxidoreductase | VAPA_RS15760 | Not Available | Positive | 3372376 - 3373458 | 39045.3 |
| trna glutamyl-q(34) synthetase gluqrs | VAPA_RS15765 | Not Available | Positive | 3373466 - 3374389 | 33470.6 |
| trna (guanosine(46)-n7)-methyltransferase trmb | VAPA_RS15770 | Not Available | Positive | 3374389 - 3375132 | 27315.8 |
| abc transporter substrate-binding protein | VAPA_RS15775 | Not Available | Positive | 3375232 - 3376389 | 39906.0 |
| crp/fnr family transcriptional regulator | VAPA_RS15780 | Not Available | Negative | 3376394 - 3377113 | 25852.8 |
| hd domain-containing protein | VAPA_RS15785 | Not Available | Positive | 3377216 - 3377806 | 22376.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
