Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilw family protein | VAPA_RS15640 | Not Available | Negative | 3349231 - 3350034 | 28417.8 |
| type iv pilus modification protein pilv | VAPA_RS15645 | Not Available | Negative | 3350031 - 3350570 | 18284.7 |
| gsph/fimt family pseudopilin | VAPA_RS15650 | Not Available | Negative | 3350586 - 3351095 | 18090.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | VAPA_RS15655 | Not Available | Positive | 3351295 - 3352422 | 39334.3 |
| riboflavin synthase | VAPA_RS15660 | Not Available | Positive | 3352478 - 3353146 | 23207.6 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | VAPA_RS15665 | Not Available | Positive | 3353143 - 3354297 | 40769.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | VAPA_RS15670 | Not Available | Positive | 3354311 - 3354778 | 16183.5 |
| transcription antitermination factor nusb | VAPA_RS15675 | Not Available | Positive | 3354775 - 3355320 | 19981.6 |
| pyridoxal phosphate-dependent aminotransferase | VAPA_RS15680 | Not Available | Positive | 3355317 - 3356513 | 43532.0 |
| ybgc/fadm family acyl-coa thioesterase | VAPA_RS15685 | Not Available | Positive | 3356510 - 3356968 | 17173.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
