Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gyd domain-containing protein | VAPA_RS15595 | Not Available | Positive | 3334046 - 3334339 | 10594.0 |
| duf349 domain-containing protein | VAPA_RS15600 | Not Available | Negative | 3334465 - 3337383 | 103261.0 |
| duf748 domain-containing protein | VAPA_RS15605 | Not Available | Negative | 3337513 - 3341325 | 134577.0 |
| lytic transglycosylase domain-containing protein | VAPA_RS15610 | Not Available | Positive | 3341902 - 3342759 | 30351.6 |
| serine hydroxymethyltransferase | VAPA_RS15615 | Not Available | Positive | 3342945 - 3344189 | 44828.9 |
| transcriptional regulator nrdr | VAPA_RS15620 | Not Available | Positive | 3344211 - 3344654 | 17093.7 |
| type iv pilin protein | VAPA_RS15625 | Not Available | Negative | 3344670 - 3345134 | 16501.7 |
| pilus assembly protein | VAPA_RS35175 | Not Available | Negative | 3345158 - 3347002 | 63690.1 |
| hypothetical protein | VAPA_RS35180 | Not Available | Negative | 3347052 - 3348527 | 53313.5 |
| pilx n-terminal domain-containing pilus assembly protein | VAPA_RS15635 | Not Available | Negative | 3348548 - 3349234 | 24634.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
