Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | VAPA_RS15545 | Not Available | Negative | 3324837 - 3326105 | 45502.5 |
| trna lysidine(34) synthetase tils | VAPA_RS15550 | Not Available | Negative | 3326176 - 3327153 | 35025.8 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | VAPA_RS15555 | Not Available | Negative | 3327174 - 3328154 | 36601.7 |
| dna-3-methyladenine glycosylase family protein | VAPA_RS15560 | Not Available | Negative | 3328171 - 3328821 | 24149.3 |
| cysteine--trna ligase | VAPA_RS15565 | Not Available | Negative | 3328839 - 3330215 | 50832.3 |
| tetratricopeptide repeat protein | VAPA_RS15570 | Not Available | Positive | 3330407 - 3330997 | 21504.5 |
| peptidylprolyl isomerase | VAPA_RS15575 | Not Available | Positive | 3331077 - 3331676 | 21459.8 |
| peptidylprolyl isomerase | VAPA_RS15580 | Not Available | Positive | 3331707 - 3332219 | 18349.7 |
| udp-2,3-diacylglucosamine diphosphatase | VAPA_RS15585 | Not Available | Positive | 3332245 - 3333015 | 28397.7 |
| zinc-dependent peptidase | VAPA_RS15590 | Not Available | Positive | 3333024 - 3333815 | 29301.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
