Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hisa/hisf-related tim barrel protein | VAPA_RS15435 | Not Available | Negative | 3305719 - 3306459 | 26001.1 |
| atp-grasp domain-containing protein | VAPA_RS15440 | Not Available | Positive | 3306489 - 3307478 | 34815.2 |
| hydantoinase/oxoprolinase family protein | VAPA_RS15445 | Not Available | Positive | 3307465 - 3308565 | 38634.7 |
| amino acid kinase | VAPA_RS15450 | Not Available | Positive | 3308565 - 3309164 | 21700.3 |
| (5-formylfuran-3-yl)methyl phosphate synthase | VAPA_RS15455 | Not Available | Negative | 3309168 - 3309872 | 23790.1 |
| duf447 domain-containing protein | VAPA_RS15460 | Not Available | Negative | 3309869 - 3310453 | 21266.7 |
| duf6513 domain-containing protein | VAPA_RS15465 | Not Available | Negative | 3310450 - 3311928 | 53468.8 |
| flavoprotein | VAPA_RS15470 | Not Available | Negative | 3311907 - 3312560 | 23305.9 |
| sigma-54-dependent fis family transcriptional regulator | VAPA_RS15475 | Not Available | Negative | 3312580 - 3314625 | 74763.0 |
| dihydroneopterin aldolase | VAPA_RS15480 | Not Available | Positive | 3314930 - 3315361 | 15888.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
