Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | VAPA_RS15385 | Not Available | Positive | 3294542 - 3295549 | 36115.0 |
| histidine kinase | VAPA_RS15390 | Not Available | Positive | 3295546 - 3296925 | 50471.0 |
| response regulator transcription factor | VAPA_RS15395 | Not Available | Positive | 3296922 - 3297569 | 23302.4 |
| had family hydrolase | VAPA_RS15400 | Not Available | Negative | 3297595 - 3298251 | 23946.7 |
| chorismate-binding protein | VAPA_RS15405 | Not Available | Negative | 3298286 - 3300190 | 68260.0 |
| formaldehyde-activating enzyme | VAPA_RS15410 | Not Available | Negative | 3300193 - 3300726 | 19548.6 |
| formylmethanofuran dehydrogenase subunit c | VAPA_RS15415 | Not Available | Negative | 3300769 - 3301599 | 28670.6 |
| formylmethanofuran--tetrahydromethanopterin n-formyltransferase | VAPA_RS15420 | Not Available | Negative | 3301596 - 3302558 | 33001.9 |
| formylmethanofuran dehydrogenase subunit a | VAPA_RS15425 | Not Available | Negative | 3302573 - 3304258 | 61311.5 |
| formylmethanofuran dehydrogenase subunit b | VAPA_RS15430 | Not Available | Negative | 3304255 - 3305487 | 42746.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
