Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf58 domain-containing protein | VAPA_RS15340 | Not Available | Positive | 3286719 - 3287594 | 32661.1 |
| hypothetical protein | VAPA_RS15345 | Not Available | Positive | 3287591 - 3288511 | 33877.1 |
| vwa domain-containing protein | VAPA_RS15350 | Not Available | Positive | 3288527 - 3289531 | 36507.4 |
| hypothetical protein | VAPA_RS15355 | Not Available | Positive | 3289528 - 3290079 | 19791.9 |
| vwa domain-containing protein | VAPA_RS15360 | Not Available | Positive | 3290076 - 3291083 | 37250.0 |
| pyrroloquinoline quinone biosynthesis protein pqqe | VAPA_RS15365 | Not Available | Negative | 3291067 - 3292218 | 42880.2 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | VAPA_RS15370 | Not Available | Negative | 3292215 - 3292490 | 10259.3 |
| pyrroloquinoline-quinone synthase pqqc | VAPA_RS15375 | Not Available | Negative | 3292508 - 3293272 | 29231.6 |
| pyrroloquinoline quinone biosynthesis protein pqqb | VAPA_RS15380 | Not Available | Negative | 3293290 - 3294213 | 32911.4 |
| pyrroloquinoline quinone precursor peptide pqqa | VAPA_RS33910 | Not Available | Negative | 3294296 - 3294370 | 2851.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
