Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent catabolism-associated beta-propeller protein | VAPA_RS15290 | Not Available | Negative | 3277318 - 3278313 | 34752.9 |
| abc transporter atp-binding protein | VAPA_RS15295 | Not Available | Negative | 3278353 - 3279066 | 25748.1 |
| methanol/ethanol family pqq-dependent dehydrogenase | VAPA_RS15300 | Not Available | Positive | 3279590 - 3281416 | 66257.7 |
| c-type cytochrome | VAPA_RS15305 | Not Available | Positive | 3281530 - 3281934 | 14781.9 |
| quinoprotein dehydrogenase-associated putative abc transporter substrate-binding protein | VAPA_RS15310 | Not Available | Positive | 3281931 - 3282821 | 32503.6 |
| hypothetical protein | VAPA_RS15315 | Not Available | Positive | 3282838 - 3283521 | 25129.4 |
| hypothetical protein | VAPA_RS15320 | Not Available | Positive | 3283553 - 3283924 | 13459.4 |
| cytochrome d1 domain-containing protein | VAPA_RS15325 | Not Available | Positive | 3283947 - 3284927 | 34129.5 |
| srpbcc family protein | VAPA_RS15330 | Not Available | Positive | 3284976 - 3285521 | 19410.1 |
| aaa family atpase | VAPA_RS15335 | Not Available | Positive | 3285547 - 3286566 | 38068.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
