Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | VAPA_RS15240 | Not Available | Negative | 3266462 - 3267166 | 24977.3 |
| had-ia family hydrolase | VAPA_RS15245 | Not Available | Negative | 3267167 - 3267970 | 28571.3 |
| cbbx protein | VAPA_RS15250 | Not Available | Negative | 3267967 - 3268896 | 34458.5 |
| ribulose bisphosphate carboxylase small subunit | VAPA_RS15255 | Not Available | Negative | 3268933 - 3269352 | 15984.8 |
| form i ribulose bisphosphate carboxylase large subunit | VAPA_RS15260 | Not Available | Negative | 3269385 - 3270842 | 53398.8 |
| lysr family transcriptional regulator | VAPA_RS15265 | Not Available | Positive | 3270973 - 3271950 | 35228.2 |
| tonb-dependent receptor | VAPA_RS15270 | Not Available | Negative | 3271969 - 3274266 | 83086.7 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS15275 | Not Available | Negative | 3274280 - 3275275 | 35287.8 |
| yran family protein | VAPA_RS15280 | Not Available | Negative | 3275272 - 3276161 | 32053.8 |
| abc transporter substrate-binding protein | VAPA_RS15285 | Not Available | Negative | 3276143 - 3277315 | 41242.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
